CDS

Accession Number TCMCG057C31980
gbkey CDS
Protein Id XP_018441400.1
Location complement(join(10715405..10715506,10715615..10715690,10715824..10715932,10716018..10716088,10716167..10717059,10717177..10717317,10717407..10717469,10717712..10717714))
Gene LOC108813361
GeneID 108813361
Organism Raphanus sativus

Protein

Length 485aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018585898.1
Definition PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category A
Description U4 U6 small nuclear ribonucleoprotein
KEGG_TC -
KEGG_Module M00354        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12844        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005687        [VIEW IN EMBL-EBI]
GO:0005690        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006342        [VIEW IN EMBL-EBI]
GO:0006346        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009409        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009845        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0015030        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0030532        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045814        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070417        [VIEW IN EMBL-EBI]
GO:0071011        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090351        [VIEW IN EMBL-EBI]
GO:0097525        [VIEW IN EMBL-EBI]
GO:0097526        [VIEW IN EMBL-EBI]
GO:0120114        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCAACTCTTGAAGACTCTTTCCTCGCAGACCTCGACGAGTTATCTGACAATGAAGCAGAACTGGAGGAGTCTGATGGTGATGATGCAAAAAAGGATGATGAAGATATCGACATGGACATGGCTGACTTAGAAACCCTTAACTACGATGATCTCGATTCCGTTTCTAAGCTCCAGAAATCTCAGAGATATCTTGACATTATGCAGAAAGTGAAAGAGGCTCTTGGAAAGGAATCTGATGGAGCGGAGAAAGGAACTGTACTAGAAGATGATCCTGAATACAAGCTAATCGTGGATTGCAACCAGCTCTCAGTCGACATTGAGAACGAGATTGCCATAGTCCACAACTTCATCCGTGACAAGTACAGACTCAAGTTTCAAGAGCTTGAGTCTCTGGTGAACCACCCTATTGATTACGCCCGCGTTGTCAAGAAAATAGGCAACGAGACGGATCTAACACTCGTCAATCTTGAAGGCCTTCTTCCCTCTGCTATCATCATGGTTGTTTCTGTCACTGCCTTGACCACTAAAGGGAGCCCACTCCCAGAGGATGTCCTGGAGAAGACTCTAGAGGCTTGTGATCGAGCTTTAGATCTTGATTCCGCTAGGAAGAAGGTTCTTGACTTTGTTGAAAGCAAGATGGGGTCTATCGCGCCGAATCTCTCCGCCATTGTTGGGAGTGCTGTTGCAGCCAAGCTGATGGGGACCGCTGGAGGTTTGTCAGCGCTTGCTAAAATGCCTGCCTGTAATGTTCAGGTTCTTGGCCACAAGAGGAAGAACCTTGCCGGGTTCTCTAGTGCAACGTCGCAGTCACGTGTGGGTTATCTGGAGCAGACGGAGATTTTCCAAAGCACGCCTCCGGCGCTTAAGAGTCGCGCCGGCAGGATCTTGGCGGCAAAGTCGACTTTGGCAGCTAGAGTTGATGCTACCAGAGGAGACCCATCGGGAACAAATGGGAAAGCTTTGAGGGAAGAGATCCGTAAGAAGATTGAGAAGTGGCAAGAACCTCCTCCGGCAAGGCAGCCTAAGCCACTTCCTGTTCCTGACTCTGAGCCTAAAAAAAGAAGAGGTGGTCGCCGTCTAAGGAAAATGAAAGAAAGGTATGCAGTGACAGACATGAGGAAGCTTGCCAACAGGATGGCGTTTGGTACACCCGAAGAGAGCTCTCTTGGTGATGGATTAGGTGAAGGATATGGAATGCTTGGCCAGGCTGGGAGCAACAGGCTGCGTATATCCAGTGTTCCCAGCAAGCTGAAGATTAATCCCACCATTGCCAAAAAGCTGAAAGAAAGAAACTATGCGAGTGGTGCCACTACCTCTGGATTGACTTCGAGTCTGGCTTTTACTCCTGTGCAGGGAATAGAGCTGTGTAATCCTCAACAGGCTTTAGGATTAGGCAGTGGGACTCAAAGCACTTACTTTTCAGAGTCAGGGACCTTCTCTAAGCTCAAGAAATAA
Protein:  
MATLEDSFLADLDELSDNEAELEESDGDDAKKDDEDIDMDMADLETLNYDDLDSVSKLQKSQRYLDIMQKVKEALGKESDGAEKGTVLEDDPEYKLIVDCNQLSVDIENEIAIVHNFIRDKYRLKFQELESLVNHPIDYARVVKKIGNETDLTLVNLEGLLPSAIIMVVSVTALTTKGSPLPEDVLEKTLEACDRALDLDSARKKVLDFVESKMGSIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQVLGHKRKNLAGFSSATSQSRVGYLEQTEIFQSTPPALKSRAGRILAAKSTLAARVDATRGDPSGTNGKALREEIRKKIEKWQEPPPARQPKPLPVPDSEPKKRRGGRRLRKMKERYAVTDMRKLANRMAFGTPEESSLGDGLGEGYGMLGQAGSNRLRISSVPSKLKINPTIAKKLKERNYASGATTSGLTSSLAFTPVQGIELCNPQQALGLGSGTQSTYFSESGTFSKLKK